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PUBLICATIONS DURING 2014 

 Boradia, V.M.; Malhotra, H.; Thakkar, J.S.; Tillu, V.A.; Vuppala, B.; Patil, P.; Sheokand, N.; Sharma, P.; Chauhan, A.S.; Raje, M. and Raje, C.I.

Mycobacterium tuberculosis acquires iron by cell-surface sequestration and internalization of human holo-transferrin. Nat. Commun., 5, 4730, 2014.

 

Sheokand, N.; Malhotra, H.; Kumar, S.; Tillu, V.A.; Chauhan, A.S.; Raje, C.I. and Raje, M.

Moonlighting cell-surface GAPDH recruits apotransferrin to effect iron egress from mammalian cells. J. Cell Sci., 127, 4279-4291, 2014.

 

Shukla, J.; Gupta, R.; Thakur, K.G.; Gokhale, R. and Gopal, B.

Structural basis for the redox sensitivity of the Mycobacterium tuberculosis SigK-RskA σ-anti-σ complex. Acta Crystallogr. D Biol. Crystallogr, 70, 1026-1036, 2014.

 

Priyanka, Shorie, M.; Bhalla, V.; Pathania, P. and Suri, C.R.

Nanobioprobe mediated DNA aptamers for explosive detection. Chem. Commun. (Camb)., 50, 1080-1082, 2014.

 

Sathyabama, S.; Khan, N. and Agrewala, J.N.

Friendly pathogens: prevent or provoke autoimmunity. Crit. Rev. Microbiol., 40, 273-280, 2014.

 

Tuteja, S.K.; Sabherwal, P.; Deep, A.; Rastogi, R.; Paul, A.K. and Suri, C.R.

Biofunctionalized rebar graphene (f-RG) for label-free detection of cardiac marker troponin I. ACS Appl. Mater. Interfaces., 6, 14767-14771, 2014.

 

Sabherwal, P.; Shorie, M.; Pathania, P.; Chaudhary, S.; Bhasin, K.K.; Bhalla, V. and Suri, C.R.

Hybrid aptamer-antibody linked fluorescence resonance energy transfer based detection of trinitrotoluene. Anal Chem., 86, 7200-7204, 2014.

 

Siddiqui, K.F.; Amir, M.; Gurram, R.K.; Khan, N.; Arora, A.; Rajagopal, K. and Agrewala, J.N.

Latency-associated protein Acr1 impairs dendritic cell maturation and functionality: a possible mechanism of immune evasion by Mycobacterium tuberculosis. J. Infect. Dis.,  209, 1436-1445, 2014.

 

Bajaj, A.; Mayilraj, S.; Mudiam, M.K.; Patel, D.K. and Manickam, N.

Isolation and functional analysis of a glycolipid producing Rhodococcus sp. strain IITR03 with potential for degradation of 1,1,1-trichloro-2,2-bis(4-chlorophenyl)ethane (DDT). Bioresource Technology, 167, 398-406, 2014.

 

Dkhar, H.K.; Nanduri, R.; Mahajan, S.; Dave, S.; Saini, A.; Somavarapu, A.K.; Arora, A.; Parkesh, R.; Thakur, K.G.; Mayilraj, S. and Gupta, P.

Mycobacterium tuberculosis keto-mycolic acid and macrophage nuclear receptor TR4 modulate foamy biogenesis in granulomas: a case of a heterologous and noncanonical ligand-receptor pair. J. Immunol., 193, 295-305, 2014.

 

Maurya, N.; Gujar, R.; Gupta, M.; Yadav, V.; Verma, S. and Sen, P.

Immunoregulation of dendritic cells by the receptor T cell Ig and mucin protein-3 via Bruton's tyrosine kinase and c-Src. J. Immunol.,193, 3417-3425, 2014.

 

Singh, R.; Vijjamarri, A. K.; Das, A. K.; Bansal, R. and Sarkar, D.

A transcriptional co-repressor regulatory circuit controlling the heat-shock response of Mycobacterium tuberculosis. Molecular Microbiology, 94, 450-465, 2014.

 

Pandey, S.K.; Vinayaka, A.C.; Rishi, D.B.; Rishi, P. and Suri, C.R.

Immuno-fluorescence based Vi capsular polysaccharide detection for specific recognition of Salmonella entericaserovarTyphi in clinical samples. Anal. Chim. Acta., 841, 51-57, 2014.

 

Tuteja, S.K.; Priyanka, Bhalla, V.; Deep, A.; Paul, A.K. and Suri, C.R.

Graphene-gated biochip for the detection of cardiac marker Troponin I. Anal. Chim. Acta., 809, 148-154, 2014.

 

Gurram, R.K.; Kujur, W.; Maurya, S.K. and Agrewala, J.N.

Caerulomycin A enhances transforming growth factor-β (TGF-β)-Smad3 protein signaling by suppressing interferon-γ (IFN-γ)-signal transducer and activator of transcription 1 (STAT1) protein signaling to expand regulatory T cells (Tregs). J. Biol. Chem., 289,17515-17528, 2014.

 

Kaur, H.; Singh, S.; Rathore, Y.S.; Sharma, A.; Furukawa, K.; Hohmann, S.; Ashish, and Mondal, A.K.

Differential role of HAMP-like linkers in regulating the functionality of the group III histidine kinase DhNik1p. J. Biol. Chem., 289, 20245-20258, 2014.

 

Arif, E.; Rathore, Y.S.; Kumari, B.; Ashish, F.; Wong, H.N.; Holzman, L.B. and Nihalani, D.

Slit diaphragm protein Neph1 and its signaling: a novel therapeutic target for protection of podocytes against glomerular injury. J. Biol. Chem., 289, 9502-9518, 2014.

 

Kaur, H.; Singh, S.; Rathore, Y.S.; Sharma, A.; Furukawa, K.; Hohmann, S.; Ashish, and Mondal, A.K.

Differential role of HAMP-like linkers in regulating the functionality of the group III histidine kinase DhNik1p. J. Biol. Chem., 289, 20245-20258, 2014.

 

Arif, E.; Rathore, Y.S.; Kumari, B.; Ashish, F.; Wong, H.N.; Holzman, L.B. and Nihalani, D.

Slit diaphragm protein Neph1 and its signaling: a novel therapeutic target for protection of podocytes against glomerular injury. J. Biol. Chem., 289, 9502-9518, 2014.

 

Mushtaq, K.; Chodisetti, S.B.; Rai, P.K.; Maurya, S.K.; Amir, M.; Sheikh, J.A. and Agrewala, J.N.

Decision-making critical amino acids: role in designing peptide vaccines for eliciting Th1 and Th2 immune response. Amino Acids., 46, 1265-1274, 2014.

 

Sharma, G.; Dutta, R.K.; Khan, M.A.; Ishaq, M.; Sharma, K.; Malhotra, H. and Majumdar, S.

IL-27 inhibits IFN-γ induced autophagy by concomitant induction of JAK/PI3 K/Akt/mTOR cascade and up-regulation of Mcl-1 in Mycobacterium tuberculosis H37Rv infected macrophages. Int. J. Biochem. Cell. Biol., 55, 335-347, 2014.

 

Singh, A.K.; Rautela, R. and Cameotra, S.S.

Substrate dependent in vitro antifungal activity of Bacillus sp strain AR2. Microb. Cell Fact., 13, 67, 2014.

 

Singh, A.K.; Dhanjal, S. and Cameotra, S.S.

Surfactin restores and enhances swarming motility under heavy metal stress. Colloids Surf. B. Biointerfaces., 116, 26-31, 2014.

 

Malhotra, A.; Sharma, N.; Kumar, N.; Dolma, K.; Sharma, D.; Nandanwar, H. and Choudhury, A.R.

Multi-analytical approach to understand biomineralization of gold using rice bran: a novel and economical route. RSC Advances., 4, 39484-39490, 2014.

 

Choudhury, A.R.; Malhotra, A.; Bhattacharjee, P. and Prasad, G.S.

Facile and rapid thermo-regulated biomineralization of gold by pullulan and study of its thermodynamic parameters. Carbohydr. Polym., 106,154-159, 2014.

 

Chopra, L.; Singh, G.; Choudhary, V. and Sahoo, D.K.

Sonorensin: an antimicrobial peptide, belonging to the heterocycloanthracin subfamily of bacteriocins, from a new marine isolate, Bacillus sonorensis MT93. Appl. Environ. Microbiol., 80, 2981-2990, 2014.

 

Midha, S. and Patil, P.B

Genomic Insights into the Evolutionary Origin of Xanthomonasaxonopodispv. citri and Its Ecological Relatives. Appl. Environ. Microbiol., 80 6266-6279, 2014.

 

Mehta, A.; Prasad, G.S. and Choudhury, A.R.

Cost effective production of pullulan from agri-industrial residues using response surface methodology. Int. J. Biol. Macromol., 64, 252-256, 2014.

 

Boradia, V.M.; Raje, M. and Raje, C.I.

Protein moonlighting in iron metabolism: glyceraldehyde-3-phosphate dehydrogenase (GAPDH). Biochem. Soc. Trans., 42, 1796-1801, 2014.

 

Kaur, R.; Ramesh, M.; Bharatam, P.V. and Kishore, R.

Self-association behavior of a novel nonproteinogenic β-strand-mimic in an organic solvent. J. Phys. Chem. B., 118, 9199-9208, 2014.

 

Pandey, K.; Dhoke, R.R.; Rathore, Y.S.; Nath, S.K.; Verma, N.; Bawa, S. and Ashish.

Low pH overrides the need of calcium ions for the shape-function relationship of calmodulin: resolving prevailing debates. J. Phys. Chem. B., 118, 5059-5074, 2014.

 

Kaur, G. and Subramanian, S.
Repurposing TRASH: emergence of the enzyme organomercuriallyase from a non-catalytic zinc finger scaffold. J. Struct. Biol., 188, 16-21, 2014.

 

Srinivasan, V.B.; Singh, B.B.; Priyadarshi, N.; Chauhan, N.K. and Rajamohan, G.

Role of novel multidrug efflux pump involved in drug resistance in Klebsiellapneumoniae. PLoS One., 9, e96288, 2014.

 

Kumar, S.; Sharma, P.; Arora, K.; Raje, M. and Guptasarma, P.

Calcium binding to beta-2-microglobulin at physiological pH drives the occurrence of conformational changes which cause the protein to precipitate into amorphous forms that subsequently transform into amyloid aggregates. PLoS One., 9,  e95725, 2014.

 

Singla, A.K.; Gurram, R.K.; Chauhan, A.; Khatri, N.; Vohra, R.M.; Jolly, R.S. and Agrewala, J.N.

Caerulomycin A suppresses immunity by inhibiting T cell activity. PLoS One., 9: e107051, 2014.

 

Singh, A.; Vaidya, B.; Khatri, I.; Srinivas, T.N.; Subramanian, S.; Korpole, S. and Pinnaka, A.K.

GrimontiaindicaAK16(T), sp. nov., isolated from a seawater sample reports the presence of pathogenic genes similar to Vibrio genus. PLoS One., 9: e85590, 2014.

 

Mehta, A.; Sidhu, C.; Pinnaka, A.K. and Choudhury, A. R.

Extracellular Polysaccharide Production by a Novel Osmotolerant Marine Strain of Alteromonasmacleodii and Its Application towards Biomineralization of Silver. PLoS One., 9:e98798, 2014.

 

Singh, H.; Singh, S. and Raghava, G.P.S.

Evaluation of protein dihedral angle prediction  methods. PLoS One., 9: e10566, 2014.

 

Chauhan, J.S.; Dhanda, S.K.; Singla, D.; Open Source Drug Discovery Consortium, Agarwal, S.M. and Raghava G.P.S.

QSAR-based models for designing quinazoline/imidazothiazoles/pyrazolopyrimidines based inhibitors against wild and mutant EGFR. PLoS One., 9: e101079, 2014.

 

Agrawal, P.; Gupta, P.; Swaminathan, K. and Parkesh, R.

α-Glucan Pathway as a Novel Mtb Drug Target: Structural Insights and Cues for Polypharmcological Targeting of GlgB and GlgE. Curr. Med. Chem., 21, 4074-4084, 2014.

 

Lohan, S.; Cameotra, S.S. and Bisht, G.S.

Antibacterial evaluation of structurally amphipathic, membrane active small cationic peptidomimetics: synthesized by incorporating 3-amino benzoic acid as peptidomimetic element. Eur. J. Med. Chem., 83, 102-115, 2014.

 

Lohan, S.; Monga, J.; Cameotra, S.S. and Bisht, G.S.

In vitro and in vivo antibacterial evaluation and mechanistic study of ornithine based small cationic lipopeptides against antibiotic resistant clinical isolates. Eur. J. Med. Chem., 88, 19-27, 2014.

 

Kaur, G.; Dutta, D. and Thakur, K.G.

Crystal structure of Mycobacterium tuberculosis CarD, an essential RNA polymerase binding protein, reveals a quasidomain-swapped dimeric structural architecture. Proteins., 82, 879-884, 2014.

 

Lohan, S.; Kalanta, A.; Sonkusre, P.; Cameotra, S.S. and Bisht, G.S.

Development of novel membrane active lipidatedpeptidomimetics active against drug resistant clinical isolates. Bioorg. Med. Chem., 22, 4544-4552, 2014.

 

Sharma, D.; Mayilraj, S and Manhas, R.K.

Streptomyces amritsarensis sp. nov.,exhibitingbroad-spectrum antimicrobial activity.  Antonie. Van. Leeuwenhoek, 105, 943-949, 2014.

 

Dastager, S.G.; Mawlankar, R.; Krishnamurthi, S.; Ramana, V  and Shouche, Y.
Bacillus enclensis sp. nov.isolated from marine sediment. Antonie. Van. Leeuwenhoek J. Microbiol. 105, 199-206, 2014.

 

Dastager, S.G.; Mawlankar, R.; Krishnamurthi S.; Shan-Kun T.; Jae-Chan L.; Venkata R. and Shouche, Y.S.

Fictibacillusenclensis sp. nov., isolated from marine sediment. Antonie. Van. Leeuwenhoek J. Microbiol., 105, 461-469, 2014.

 

Kaur, N.; Kumar, R.M.; Kaur, G. and Mayilraj, S.

Isoptericolarhizophila sp. nov., a novel actinobacterium isolated from rhizosphere soil. Antonie. Van. Leeuwenhoek., 106, 301-307, 2014.

 

Rautela, R.; Singh, A.K.;Shukla, A. and Cameotra, S.S.

Lipopeptides from Bacillus strain AR2 inhibits biofilm formation by Candida albicans. Antonie. Van. Leeuwenhoek., 105, 809-821, 2014.

 

Kumar, S.; Kanudia, P.; Karthikeyan, S. and Chakraborti, P.K.

Identification of crucial amino acids of bacterial Peptide deformylases affecting enzymatic activity in response to oxidative stress. J. Bacteriol., 196, 90-99, 2014.

 

Kaur, G.;Sengupta, S.; Kumar, V.; Kumari, A.; Ghosh, A.; Parrack, P. and Dutta, D.

Novel MntR-independent mechanism of manganese homeostasis in Escherichia coli by the ribosome-associated protein HflX. J. Bacteriol., 196, 2587-2597, 2014.

 

Kaur, G.; Sathyabama, S.; Arora, A.; Verma, S.; Mubin, N.; Agrewala, J.N. and Mayilraj, S.

Genome sequencing, annotation and comparative genomic analysis of Shigelladysenteriae strain SD1D. Gut Pathog., 6, 28, 2014.

 

Sathyabama, S.; Kaur, G.; Arora, A.; Verma, S.; Mubin, N.; Mayilraj, S. and Agrewala, J.N.

Genome sequencing, annotation and analysis of Salmonella enterica sub species salamae strain DMA-1. Gut Pathog., 6,8, 2014.

 

Kaur, S.; Yawar, M.; Pinnaka, A.K. and Korpole, S.

Hungatellaeffluvii gen. nov., sp. nov.an obligate anaerobic bacterium isolated from effluent treatment plant and reclassification of Clostridium hathewayi as Hungatellahathewayi comb. nov. Int. J. Syst. Evol. Microbiol., 64, 710-718, 2014.

 

Nupur, P.; Srinivas, T. N. R.; Takaichi, S. and Pinnaka, A.K.

Rhodovulum mangrovi sp. nov., a phototrophic alphaproteobacterium isolated from a sediment sample of Coringa mangrove forest, India. Int. J. Syst. Evol. Microbiol., 64, 3168-3173, 2014.

 

Panwar, B. and Raghava, G.P.S.

Prediction of uridine modifications in tRNA sequences. BMC Bioinformatics.,15, 326, 2014.

 

Sharma, A.; Singla, D.; Rashid, M. and Raghava, G.P.S.

Designing of peptides with desired half-life in intestine-like environment. BMC Bioinformatics., 15, 282, 2014.

 

Manickam, N.; Singh, N.K.; Bajaj, A.; Kumar, R.M.; Kaur, G.; Kaur, N.; Bala, M.; Kumar, A. and Mayilraj, S.

Bacillus mesophilum sp. nov., strain IITR-54T, a novel 4-chlorobiphenyl dechlorinating bacterium. Arch. Microbiol., 196, 517-523, 2014.

 

Singh, N.K.;Kaur, C.; Kumar, N.;Velmurugan, S.;Citarasu, T. and Mayilraj, S.

Bacillus aequororis sp. nov., Isolated From Marine Sediment. Curr. Microbiol., 69,758-762, 2014.

 

Khan, M.S.; Ahmad, I.; Cameotra, S.S. and Botha, F.

Sub-MICs of Carumcopticum and Thymus vulgaris influence virulence factors and biofilm formation in Candida spp. BMC Complement Altern. Med., 14, 337, 2014.

 

Dhanjal, N.I.;Kaur, P.;Sud, D. and Cameotra, S.S.

Persistence and biodegradation of quinalphos using soil microbes. Water Environ Res., 86, 457-461, 2014.

 

Khan, M.S.; Ahmad, I. and Cameotra, S.S.

Carumcopticum and Thymus vulgaris oils inhibit virulence in Trichophytonrubrum and Aspergillus spp. Braz. J. Microbiol., 45, 523-531, 2014.

 

Singla, A.K.; Gurram, R.K.; Chauhan, A.; Khatri, N.; Vohra, R.M.; Jolly, R.S. and Agrewala, J.N.

Cerulomycin A: a potent novel immunosuppressive agent. Transplantation., 97,e57-59, 2014.

 

Sonkusre, P.; Nanduri, R.; Gupta, P. and Cameotra, S.S.

Improved Extraction of Intracellular Biogenic Selenium Nanoparticles and their Specificity for Cancer Chemoprevention. J. Nanomed. Nanotechnol., 5, 194, 2014.
 
Khatri, N.; Sagar, A.; Peddada, N.; Choudhary, V.; Chopra, B.S.; Garg, V.; Garg, R. and Ashish.
Plasma Gelsolin Levels Decrease in Diabetic State and Increase upon Treatment with F-Actin Depolymerizing Versions of Gelsolin. Journal of Diabetes Research., 8, 2014.

 
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